BIBI IV - Advanced mode
Some useful informations
Most of the options are straigthforward understandable. Some BIBI IV specific tricks are explicited here.
You have much more database choices and parameters selection (and up to 500 extracted sequences! ).
Query sequence or species name
SSU-rDNA 16S Fasta Sequence
Selection of the Database
Selection of parameters related to the alignment process
Number of recruited sequences
Selection of the aligner
Mitigation of the query errors
this is explained here
Selection of the tree-related parameters
Level of polytomy
Send to BIBI IV
Run (or test)
Results are looking like those of the One click mode.
Remember that there is only one database selected in the expert approach (no composite tree available) and no automatic optimization of the tree topology.